中国畜牧兽医 ›› 2025, Vol. 52 ›› Issue (9): 4291-4303.doi: 10.16431/j.cnki.1671-7236.2025.09.027

• 预防兽医 • 上一篇    

1株含有LIPI-4的单增李斯特菌弱毒株的比较基因组分析

祁亚涛1, 刘嘉1, 康立超2, 王静1, 马勋1, 刘彩霞1, 钱瑞宣1, 刘璐1, 殷中科1   

  1. 1. 石河子大学动物科技学院, 石河子 832000;
    2. 新疆农垦科学院农业质量标准与检测技术研究所, 石河子 832000
  • 收稿日期:2024-11-13 发布日期:2025-08-29
  • 通讯作者: 王静, 马勋 E-mail:witry100@163.com;maxun779@126.com
  • 作者简介:祁亚涛,E-mail:18094801903@163.com;刘嘉,E-mail:2655739425@qq.com。
  • 基金资助:
    国家自然科学基金(32160833、32160834、32260895)

Comparative Genomic Analysis of a Attenuated Strain of Listeria monocytogenes Containing LIPI-4

QI Yatao1, LIU Jia1, KANG Lichao2, WANG Jing1, MA Xun1, LIU Caixia1, QIAN Ruixuan1, LIU Lu1, YING Zhongke1   

  1. 1. College of Animal Science and Technology, Shihezi University, Shihezi 832000, China;
    2. Institute of Agricultural Quality Standards and Testing Technology, Xinjiang Academy of Agriculture and Reclamation Sciences, Shihezi 832000, China
  • Received:2024-11-13 Published:2025-08-29

摘要: 【目的】 探究单增李斯特菌Lm873含有毒力岛4(LIPI-4)却毒力较弱的原因,并基于基因组学评估菌株Lm873引发人李斯特菌病暴发的潜在公共卫生风险。【方法】 以单增李斯特菌弱毒株Lm873为研究对象,比较其与强毒株Lm928在不同温度、pH、NaCl浓度条件下的生长曲线差异,在不同温度下运动能力差异及在不同浓度氧化剂条件下的抗氧化应激能力差异;对菌株Lm873进行全基因组测序,对其基因组特点、毒力基因、基因组进化、功能注释进行分析。【结果】 在不同温度及pH为3.0、7.0、9.0的条件下,菌株Lm873和Lm928的生长曲线均无显著差异(P>0.05),但在pH 5.0的培养基中菌株Lm873在12 h时生长能力显著低于菌株Lm928(P<0.05)。在4.5%、7.0% NaCl 溶液中二者生长能力无显著差异(P>0.05),但在0.5%和10.0% NaCl溶液中,菌株Lm873生长能力分别在8和12 h显著低于菌株Lm928(P<0.05)。在运动性试验中,28和37 ℃培养时,菌株Lm873运动圈平均直径均显著低于菌株Lm928(P<0.05)。菌株Lm928能在含CdCl2的培养基上生长,而Lm873不生长;菌株Lm873与Lm928在含0.25、0.5、1 mmol/L CuCl2的培养基上的生长能力无明显差异,在低浓度H2O2培养基条件下,菌株Lm928生长,菌株Lm873不生长,在高浓度H2O2培养基上菌株Lm928与Lm873均不生长。基因组分析显示,菌株Lm873的全长序列为2 972 618 bp,GC含量为37.88%,并含有特定的基因特征;16S rRNA系统发育树分析显示,菌株Lm873与意大利胃肠炎相关菌株HPB2262相似性最高,亲缘关系最近;基于SNP构建的系统发育树显示,菌株Lm873与中国临床分离株SHL012和引发美国人李斯特菌病的菌株FSLJ1-194亲缘关系最近,相似性最高。比较基因组学分析发现,菌株Lm873相较于Lm928,缺少与镉离子转运相关的基因和阳离子转运ATP酶。KEGG通路分析揭示菌株Lm873在鞭毛组装方面具有较少的注释基因。此外,菌株Lm873携带多种耐药性基因,表现出多重耐药性。【结论】 单增李斯特菌Lm873含有LIPI-4却是弱毒的原因与其传播能力、感染能力及对环境的抵抗力有关;通过基因进化树得出菌株Lm873具有引起人李斯特菌病暴发的潜在可能。

关键词: 单增李斯特菌; 生长曲线; 氧化应激; 运动性; 全基因组分析

Abstract: 【Objective】 This study was conducted to investigate the reasons why Listeria monocytogenes Lm873 exhibited attenuated virulence despite harboring virulence island 4 (LIPI-4),and assess the potential public health risk of strain Lm873 triggering human listeriosis outbreaks based on genomics. 【Method】 Taking the Listeria monocytogenes attenuated strain Lm873 as the research object,the differences in growth curve between it and the hypervirulent strain Lm928 under different temperatures,pH,NaCl concentration conditions,the differences in motility under different temperatures and the oxidative stress resistance under different concentrations of oxidants were compared.The whole genome of strain Lm873 was sequenced,and its genome characteristics,virulence genes,genome evolution,and functional annotation were analyzed. 【Result】 No significant differences in growth profiles were observed between the two strains at different temperatures and pH of 3.0,7.0 and 9.0 (P>0.05).However,a significant reduction in the growth rate of strain Lm873 was detected at 12 h in a medium with pH 5.0 compared with strain Lm928 (P<0.05).The growth patterns in 4.5% and 7.0% NaCl solutions were comparable for both strains (P>0.05),yet strain Lm873 exhibited significantly lower growth in 0.5% NaCl solution at 8 h and in 10.0% NaCl solution at 12 h compared with Lm928 (P<0.05).In the motility test,the average diameter of the motility halo of strain Lm873 was significantly lower than that of strain Lm928 when cultured at 28 and 37 ℃ (P<0.05).Strain Lm928 grew on the medium containing CdCl2,but Lm873 did not.There was no significant difference in the growth ability of strains Lm873 and Lm928 on the medium containing 0.25,0.5 and 1 mmol/L CuCl2.On low concentration H2O2 medium,strain Lm928 grew,while Lm873 did not,whereas neither strain Lm928 nor Lm873 grew on high concentration H2O2 medium.Genomic analysis revealed that the genome of strain Lm873 was approximately 2 972 618 bp in length with GC content of approximately 37.88%,exhibiting distinct genetic features.Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain Lm873 shared the highest similarity with HPB2262,suggesting close evolutionary relationships among them.Furthermore single nucleotide polymorphism (SNP) analysis positioned it closely alongsided Chinese clinical isolate SHL012 and the U.S.-based listeriosis-causing strain FSLJ1-194,demonstrating substantial genetic similarity.Comparative genomic analysis revealed that strain Lm873 lacked genes associated with cadmium ion transport and cation-transporting ATPases compared to Lm928.KEGG pathway analysis further demonstrated that Lm873 harbored fewer annotated genes involved in flagellar assembly.Additionally,Lm873 carried multiple antibiotic resistance genes conferring multidrug resistance phenotypes. 【Conclusion】 The presence of LIPI-4 in Lm873,yet its reduced virulence,was attributed to its diminished transmission capacity,infectivity,and environmental resilience.Phylogenetic analysis suggested that Lm873 could possess the potential to trigger outbreaks of human listeriosis.

Key words: Listeria monocytogenes; growth curve; oxidative stress; motility; whole genome analysis

中图分类号: